CDS

Accession Number TCMCG017C09613
gbkey CDS
Protein Id OMP02089.1
Location join(42104..42644,42737..42923,43033..43247,43346..43536)
GeneID InterPro:IPR003388
Organism Corchorus olitorius
locus_tag COLO4_11346

Protein

Length 377aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01014688.1
Definition Reticulon [Corchorus olitorius]
Locus_tag COLO4_11346

EGGNOG-MAPPER Annotation

COG_category U
Description Reticulon-like protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K20721        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007029        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010256        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0030176        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031227        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0071458        [VIEW IN EMBL-EBI]
GO:0071782        [VIEW IN EMBL-EBI]
GO:0071786        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0098552        [VIEW IN EMBL-EBI]
GO:0098554        [VIEW IN EMBL-EBI]
GO:0098562        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGCATTTCGTGATCCAACTCTAGGAGTTGCAATATCAACAGCCGTTGGCGGGTTAACGCGAGCCATTGAAGACGTTTTAGAGACAGCTACAAGGTTTAAACCAGTTCTGAATCATCTCAACGACACAATCAGTTGGATCACTCCTAGAATCAGAGAGATAAGCCGGTCCGAAGATTTTGAGGACGAAATCCAAAGGTTGTTGGACTTATTAAATGAAGCCAAGAGAAATGTTGATAAATGTTCAAGGATAAGTTCCTGGAATTATTACAAGAAATACAAGATGGCCAAAAAGCTCATTGAACTCGACAACTCGATTCGTACGACGGTTCAATTGTTCTTTCCGGTTATGATTTTGGGTGACACAAGACAAATTCTGGATTCTGTTGATGAGTTAAAGCTTTTGTTTCTGGTCTTCTTCTTTTTTATGCTTGACGATTTCAATTCAAGTGCAAAAAATACCGGTGGGGTTGTTTCTGATATGATTCGATCAAATTCCAAGGCTTCAATTGAGAAAATCATCAAGTCTCAGCCTGCAGAGCTGGTAAGCGACATAGCTCTATGGAAGAAAAAGGAATTGAGTGGATCGCTTCTCGCCAGCTCAACTGTAACATGGCTATTGCAGCAAGTTTATGAATACAACTTTCTTACCATTGCTTCATGGGTCATCATTTTCATTGTTACTTTATTGTTCGTTTGGAGAAATGTAAATCGGTTTCAAAACAGGGAAGAAGCAATGAAGTCGAGATTGGAAGAAATCAGGGAAAAAATGGTGACGGAGATTGCAAACGCTTGTTGGGAATTGTCTGATCAAATTATCAGATGGATTCTTAATGTGACAGATGTTGAGAAAGAATGGTTTGTTTTTCCTCAAACGATTGTTTTCCTACTGATTTTCTCATACATGGGAAACTTCTTCGATCTCCCAACACTTTGTAAAGGAGTAATGATGGGCACGACACTTCCTGTCATGTGCGCCAAACATAAGGATAAAGTGCAGATATTGAGCAGTCTGGTGATGGATCATTCTGGGAAAGCCATTGAAATGGTTGGGGAGATATTAGCTGACACAGTGAACAAAAGCTTTGCTGTAGATGAGAGGAACAAGAAGAAATCAAAGAAGCAAAACTAA
Protein:  
MAAFRDPTLGVAISTAVGGLTRAIEDVLETATRFKPVLNHLNDTISWITPRIREISRSEDFEDEIQRLLDLLNEAKRNVDKCSRISSWNYYKKYKMAKKLIELDNSIRTTVQLFFPVMILGDTRQILDSVDELKLLFLVFFFFMLDDFNSSAKNTGGVVSDMIRSNSKASIEKIIKSQPAELVSDIALWKKKELSGSLLASSTVTWLLQQVYEYNFLTIASWVIIFIVTLLFVWRNVNRFQNREEAMKSRLEEIREKMVTEIANACWELSDQIIRWILNVTDVEKEWFVFPQTIVFLLIFSYMGNFFDLPTLCKGVMMGTTLPVMCAKHKDKVQILSSLVMDHSGKAIEMVGEILADTVNKSFAVDERNKKKSKKQN